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Ordering Protein Contact Matrices

JOURNAL ARTICLE published 2018 in Computational and Structural Biotechnology Journal

Research funded by European Union (FP7-IDEAS-ERC 294809)

Authors: Chuan Xu | Guillaume Bouvier | Benjamin Bardiaux | Michael Nilges | Thérèse Malliavin | Abdel Lisser

Chimeric mitochondrial peptides from contiguous regular and swinger RNA

JOURNAL ARTICLE published 2016 in Computational and Structural Biotechnology Journal

Research funded by A*MIDEX project (ANR-11-IDEX-0001-02)

Authors: Hervé Seligmann

The effects of shared information on semantic calculations in the gene ontology

JOURNAL ARTICLE published 2017 in Computational and Structural Biotechnology Journal

Research funded by National Basic Research Program of China (2015CB964601,2013CB967001) | National Natural Science Foundation of China (81570828)

Authors: Paul W. Bible | Hong-Wei Sun | Maria I. Morasso | Rasiah Loganantharaj | Lai Wei

SigTree : A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree

JOURNAL ARTICLE published 2017 in Computational and Structural Biotechnology Journal

Authors: John R. Stevens | Todd R. Jones | Michael Lefevre | Balasubramanian Ganesan | Bart C. Weimer

Genome-wide noninvasive prenatal diagnosis of monogenic disorders: Current and future trends

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Authors: Tom Rabinowitz | Noam Shomron

APPROACHES TO ENGINEER STABILITY OF BEETLE LUCIFERASES

JOURNAL ARTICLE published September 2012 in Computational and Structural Biotechnology Journal

Research funded by Russian Foundation for Basic Research ((grant 08-04-00624 and 11-04-00698))

Authors: Mikhail I. Koksharov | Natalia N. Ugarova

ENGINEERING NON-HEME MONO- AND DIOXYGENASES FOR BIOCATALYSIS

JOURNAL ARTICLE published September 2012 in Computational and Structural Biotechnology Journal

Authors: Adi Dror | Ayelet Fishman

CRISPR/Cas9 based genome editing for targeted transcriptional control in triple-negative breast cancer

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Desh Deepak Singh | Ihn Han | Eun-Ha Choi | Dharmendra Kumar Yadav

Fever temperatures modulate intraprotein dynamics and enhance the binding affinity between monoclonal antibodies and the spike protein from SARS-CoV-2

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Research funded by National Supercomputing Center, Korea Institute of Science and Technology Information (KSC-2020-CRE-0203) | Chonnam National University (2022-2574)

Authors: Dong Gun Kim | Hak Sung Kim | Yoonjoo Choi | Razvan Costin Stan

BioVisReport: A Markdown-based lightweight website builder for reproducible and interactive visualization of results from peer-reviewed publications

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Jingcheng Yang | Yaqing Liu | Jun Shang | Yechao Huang | Ying Yu | Zhihui Li | Leming Shi | Zihan Ran

Comprehensive characterization of human–virus protein-protein interactions reveals disease comorbidities and potential antiviral drugs

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Si Li | Weiwei Zhou | Donghao Li | Tao Pan | Jing Guo | Haozhe Zou | Zhanyu Tian | Kongning Li | Juan Xu | Xia Li | Yongsheng Li

Classifying breast cancer and fibroadenoma tissue biopsies from paraffined stain-free slides by fractal biomarkers in Fourier Ptychographic Microscopy

JOURNAL ARTICLE published December 2024 in Computational and Structural Biotechnology Journal

Authors: Vittorio Bianco | Marika Valentino | Daniele Pirone | Lisa Miccio | Pasquale Memmolo | Valentina Brancato | Luigi Coppola | Giovanni Smaldone | Massimiliano D’Aiuto | Gennaro Mossetti | Marco Salvatore | Pietro Ferraro

Using molecular dynamics simulations to interrogate T cell receptor non-equilibrium kinetics

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Zachary A. Rollins | Roland Faller | Steven C. George

Motif grammar: The basis of the language of gene expression

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Research funded by National Institutes of Health (R01DK115924) | Magyar Tudományos Akadémia (ÚNKP-19-4-DE-173) | Nemzeti Kutatási Fejlesztési és Innovációs Hivatal (K124298,KKP129909,PD124843)

Authors: Gergely Nagy | Laszlo Nagy

Meta-analysis of Liver and Heart Transcriptomic Data for Functional Annotation Transfer in Mammalian Orthologs

JOURNAL ARTICLE published 2017 in Computational and Structural Biotechnology Journal

Research funded by Biotechnology and Biological Sciences Research Council (BBSRC-BB/P013732/1-ISPG 2017/22,BBSRC-BB/P013740/1-ISPG 2017/22) | People Programme (PCOFUND-GA-2012-600181)

Authors: Pía Francesca Loren Reyes | Tom Michoel | Anagha Joshi | Guillaume Devailly

Computational methods in mass spectrometry-based structural proteomics for studying protein structure, dynamics, and interactions

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Research funded by Ministry of Science and ICT, South Korea (2017R1E1A1A01077412,2019M3E5D3073568)

Authors: Seungjin Na | Eunok Paek

RGL2 as an age-dependent factor regulates colon cancer progression

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Qingyu Cheng | Yupeng Wu | Honghai Xia | Xiaoyuan Song

A ROUGH GUIDE TO METABOLITE IDENTIFICATION USING HIGH RESOLUTION LIQUID CHROMATOGRAPHY MASS SPECTROMETRY IN METABOLOMIC PROFILING IN METAZOANS

JOURNAL ARTICLE published January 2013 in Computational and Structural Biotechnology Journal

Authors: David G. Watson

BILE ACID BINDING PROTEIN: A VERSATILE HOST OF SMALL HYDROPHOBIC LIGANDS FOR APPLICATIONS IN THE FIELDS OF MRI CONTRAST AGENTS AND BIO-NANOMATERIALS

JOURNAL ARTICLE published March 2013 in Computational and Structural Biotechnology Journal

Authors: Katiuscia Pagano | Simona Tomaselli | Serena Zanzoni | Michael Assfalg | Henriette Molinari | Laura Ragona

Computational biotechnology guides elucidation of the biosynthesis of the plant anticancer drug camptothecin

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Emily Amor Stander | Thomas Dugé de Bernonville | Nicolas Papon | Vincent Courdavault