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De novo whole-genome assembly in Chrysanthemum seticuspe, a model species of Chrysanthemums, and its application to genetic and gene discovery analysis

JOURNAL ARTICLE published 1 June 2019 in DNA Research

Research funded by KAKENHI (16H04877)

Authors: Hideki Hirakawa | Katsuhiko Sumitomo | Tamotsu Hisamatsu | Soichiro Nagano | Kenta Shirasawa | Yohei Higuchi | Makoto Kusaba | Masaji Koshioka | Yoshihiro Nakano | Masafumi Yagi | Hiroyasu Yamaguchi | Kenji Taniguchi | Michiharu Nakano | Sachiko N Isobe

Unravelling the epigenomic interactions between parental inbreds resulting in an altered hybrid methylome in pigeonpea

JOURNAL ARTICLE published 1 August 2018 in DNA Research

Authors: Alim Junaid | Himanshu Kumar | A R Rao | A N Patil | N K Singh | Kishor Gaikwad

Repression of Global Protein Synthesis by Eif1a-Like Genes That Are Expressed Specifically in the Two-Cell Embryos and the Transient Zscan4-Positive State of Embryonic Stem Cells

JOURNAL ARTICLE published 1 August 2013 in DNA Research

Authors: S. S. C. Hung | R. C. B. Wong | A. A. Sharov | Y. Nakatake | H. Yu | M. S. H. Ko

Genomics Approach to Abscisic Acid- and Gibberellin-responsive Genes in Rice

JOURNAL ARTICLE published 1 January 2003 in DNA Research

Authors: J. Yazaki

Comparative whole-genome analysis reveals artificial selection effects on Ustilago esculenta genome

JOURNAL ARTICLE published 1 December 2017 in DNA Research

Research funded by National Natural Science Foundation of China (31470785, 31600634)

Authors: Zihong Ye | Yao Pan | Yafen Zhang | Haifeng Cui | Gulei Jin | Alice C McHardy | Longjiang Fan | Xiaoping Yu

Population Structure and Domestication Revealed by High-Depth Resequencing of Korean Cultivated and Wild Soybean Genomes

JOURNAL ARTICLE published 1 April 2014 in DNA Research

Authors: W.-H. Chung | N. Jeong | J. Kim | W. K. Lee | Y.-G. Lee | S.-H. Lee | W. Yoon | J.-H. Kim | I.-Y. Choi | H.-K. Choi | J.-K. Moon | N. Kim | S.-C. Jeong

Z-DNA-forming sites identified by ChIP-Seq are associated with actively transcribed regions in the human genome

JOURNAL ARTICLE published October 2016 in DNA Research

Authors: So-I. Shin | Seokjin Ham | Jihwan Park | Seong Hye Seo | Chae Hyun Lim | Hyeongrin Jeon | Jounghyun Huh | Tae-Young Roh

Draft genome of a high value tropical timber tree, Teak (Tectona grandis L. f): insights into SSR diversity, phylogeny and conservation

JOURNAL ARTICLE published 1 August 2018 in DNA Research

Research funded by Department of Biotechnology, Government of India (BT/PR7143/PBD/16/1011/2012)

Authors: Ramasamy Yasodha | Ramesh Vasudeva | Swathi Balakrishnan | Ambothi Rathnasamy Sakthi | Nicodemus Abel | Nagarajan Binai | Balaji Rajashekar | Vijay Kumar Waman Bachpai | Chandrasekhara Pillai | Suma Arun Dev

The complete mitogenome assemblies of 10 diploid potato clones reveal recombination and overlapping variants

JOURNAL ARTICLE published 25 August 2021 in DNA Research

Research funded by Drs. Tai and Stromvik (J-002367/GQ-AAC-2019-2)

Authors: Sai Reddy Achakkagari | Helen H Tai | Charlotte Davidson | Hielke De Jong | Martina V Strömvik

Comparative Genome Analysis of Lactobacillus reuteri and Lactobacillus fermentum Reveal a Genomic Island for Reuterin and Cobalamin Production

JOURNAL ARTICLE published 12 May 2008 in DNA Research

Authors: H. Morita | H. Toh | S. Fukuda | H. Horikawa | K. Oshima | T. Suzuki | M. Murakami | S. Hisamatsu | Y. Kato | T. Takizawa | H. Fukuoka | T. Yoshimura | K. Itoh | D. J. O'Sullivan | L. L. McKay | H. Ohno | J. Kikuchi | T. Masaoka | M. Hattori

Exploring the evolutionary process of alkannin/shikonin O-acyltransferases by a reliable Lithospermum erythrorhizon genome

JOURNAL ARTICLE published 13 September 2021 in DNA Research

Authors: Chengyi Tang

Vector-Capping: A Simple Method for Preparing a High-Quality Full-Length cDNA Library

JOURNAL ARTICLE published 1 January 2005 in DNA Research

Authors: S. Kato

Genome-wide Identification and Molecular Characterization of Ole_e_I, Allerg_1 and Allerg_2 Domain-containing Pollen-Allergen-like Genes in Oryza sativa

JOURNAL ARTICLE published 1 January 2005 in DNA Research

Authors: S.-Y. Jiang | P. X. H. Jasmin | Y. Y. Ting | S. Ramachandran

Whole genomic DNA sequencing and comparative genomic analysis ofArthrospira platensis: high genome plasticity and genetic diversity

JOURNAL ARTICLE published August 2016 in DNA Research

Authors: Teng Xu | Song Qin | Yongwu Hu | Zhijian Song | Jianchao Ying | Peizhen Li | Wei Dong | Fangqing Zhao | Huanming Yang | Qiyu Bao

Characterization and complexity of transcriptome in Gymnocypris przewalskii using single-molecule long-read sequencing and RNA-seq

JOURNAL ARTICLE published 25 June 2021 in DNA Research

Authors: Xindan Li | Jinming Wu | Xinping Xiao | Yifeng Rong | Haile Yang | Junyi Li | Qiong Zhou | Weiguo Zhou | Jianquan Shi | Hongfang Qi | Hao Du

Phylogenetic Study of Plant Q-type C2H2 Zinc Finger Proteins and Expression Analysis of Poplar Genes in Response to Osmotic, Cold and Mechanical Stresses

JOURNAL ARTICLE published 1 April 2011 in DNA Research

Authors: D. Gourcilleau | C. Lenne | C. Armenise | B. Moulia | J.-L. Julien | G. Bronner | N. Leblanc-Fournier

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea

JOURNAL ARTICLE published 1 June 2015 in DNA Research

Authors: S. Das | H. D. Upadhyaya | D. Bajaj | A. Kujur | S. Badoni | V. Kumar | S. Tripathi | C. L. L. Gowda | S. Sharma | S. Singh | A. K. Tyagi | S. K. Parida

Dysbiosis of Salivary Microbiota in Inflammatory Bowel Disease and Its Association With Oral Immunological Biomarkers

JOURNAL ARTICLE published 1 February 2014 in DNA Research

Authors: H. S. Said | W. Suda | S. Nakagome | H. Chinen | K. Oshima | S. Kim | R. Kimura | A. Iraha | H. Ishida | J. Fujita | S. Mano | H. Morita | T. Dohi | H. Oota | M. Hattori

The Whole-genome Sequencing of the Obligate Intracellular Bacterium Orientia tsutsugamushi Revealed Massive Gene Amplification During Reductive Genome Evolution

JOURNAL ARTICLE published 28 May 2008 in DNA Research

Authors: K. Nakayama | A. Yamashita | K. Kurokawa | T. Morimoto | M. Ogawa | M. Fukuhara | H. Urakami | M. Ohnishi | I. Uchiyama | Y. Ogura | T. Ooka | K. Oshima | A. Tamura | M. Hattori | T. Hayashi

Defining Developmental Potency and Cell Lineage Trajectories by Expression Profiling of Differentiating Mouse Embryonic Stem Cells

JOURNAL ARTICLE published 8 January 2009 in DNA Research

Authors: K. Aiba | T. Nedorezov | Y. Piao | A. Nishiyama | R. Matoba | L. V. Sharova | A. A. Sharov | S. Yamanaka | H. Niwa | M. S. H. Ko