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Autocatalytic Loop, Amplification and Diffusion: A Mathematical and Computational Model of Cell Polarization in Neural Chemotaxis

JOURNAL ARTICLE published 28 August 2009 in PLoS Computational Biology

Authors: Paola Causin | Giuseppe Facchetti

Editors: Anand R. Asthagiri

https://doi.org/10.1371/journal.pcbi.1000479 Actions

Subbarrel Patterns in Somatosensory Cortical Barrels Can Emerge from Local Dynamic Instabilities

JOURNAL ARTICLE published 16 October 2009 in PLoS Computational Biology

Authors: Bard Ermentrout | Daniel J. Simons | Peter W. Land

Editors: Karl J. Friston

https://doi.org/10.1371/journal.pcbi.1000537 Actions

Script of Scripts: A pragmatic workflow system for daily computational research

JOURNAL ARTICLE published 27 February 2019 in PLOS Computational Biology

Research funded by National Human Genome Research Institute (R01HG008972) | National Human Genome Research Institute (1R01HG005859) | National Cancer Institute (CA143883) | Cancer Prevention and Research Institute of Texas (RP130397) | Gordon and Betty Moore Foundation (4559) | National Cancer Institute (P30CA016672)

Authors: Gao Wang | Bo Peng

Editors: Dina Schneidman-Duhovny

https://doi.org/10.1371/journal.pcbi.1006843 Actions

Numerical Analysis of Ca2+ Signaling in Rat Ventricular Myocytes with Realistic Transverse-Axial Tubular Geometry and Inhibited Sarcoplasmic Reticulum

JOURNAL ARTICLE published 28 October 2010 in PLoS Computational Biology

Authors: Yuhui Cheng | Zeyun Yu | Masahiko Hoshijima | Michael J. Holst | Andrew D. McCulloch | J. Andrew McCammon | Anushka P. Michailova

Editors: James Bassingthwaighte

https://doi.org/10.1371/journal.pcbi.1000972 Actions

A Petri Net Model of Granulomatous Inflammation: Implications for IL-10 Mediated Control of Leishmania donovani Infection

JOURNAL ARTICLE published 21 November 2013 in PLoS Computational Biology

Authors: Luca Albergante | Jon Timmis | Lynette Beattie | Paul M. Kaye

Editors: Denis Thieffry

https://doi.org/10.1371/journal.pcbi.1003334 Actions

Directional Summation in Non-direction Selective Retinal Ganglion Cells

JOURNAL ARTICLE published 14 March 2013 in PLoS Computational Biology

Authors: Syed Y. Abbas | Khaldoun C. Hamade | Ellen J. Yang | Scott Nawy | Robert G. Smith | Diana L. Pettit

Editors: Guenther Zeck

https://doi.org/10.1371/journal.pcbi.1002969 Actions

Machine learning identification of Pseudomonas aeruginosa strains from colony image data

JOURNAL ARTICLE published 13 December 2023 in PLOS Computational Biology

Research funded by National Science Foundation (DGE-1650044) | Foundation for the National Institutes of Health (1R21AI143296) | Centers for Disease Control and Prevention (75D30120C09782) | Foundation for the National Institutes of Health (1R21AI156817)

Authors: Jennifer B. Rattray | Ryan J. Lowhorn | Ryan Walden | Pedro Márquez-Zacarías | Evgeniya Molotkova | Gabriel Perron | Claudia Solis-Lemus | Daniel Pimentel Alarcon | Sam P. Brown

Editors: James O’Dwyer

https://doi.org/10.1371/journal.pcbi.1011699 Actions

Bioinformatics in Africa: The Rise of Ghana?

JOURNAL ARTICLE published 17 September 2015 in PLOS Computational Biology

Authors: Thomas K. Karikari

Editors: Marco Punta

https://doi.org/10.1371/journal.pcbi.1004308 Actions

Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing

JOURNAL ARTICLE published 2 October 2017 in PLOS Computational Biology

Research funded by Israel Science Foundation (ISF-NSFC joint program 2015-2018) | Edmond J. Safra Center for Bioinformatics at Tel Aviv University (Ph.D. fellowship) | Gordon and Betty Moore Foundation (US) (Data-Driven Discovery Initiative through Grant GBMF4554) | National Science Foundation (CCF-1256087) | National Science Foundation (CCF-1319998) | National Institutes of Health (R01HG007104) | Alfred P. Sloan Foundation (Fellow)

Authors: Yaron Orenstein | David Pellow | Guillaume Marçais | Ron Shamir | Carl Kingsford

Editors: Benjamin J. Raphael

https://doi.org/10.1371/journal.pcbi.1005777 Actions

A single reaction-diffusion equation for the multifarious eruptions of urticaria

JOURNAL ARTICLE published 15 January 2020 in PLOS Computational Biology

Research funded by Japan Society for the Promotion of Science London (16K17643) | Japan Science and Technology Agency (JPMJPR16E2)

Authors: Sungrim Seirin-Lee | Yuhki Yanase | Shunsuke Takahagi | Michihiro Hide

Editors: Roeland M.H. Merks

https://doi.org/10.1371/journal.pcbi.1007590 Actions

Random Field Model Reveals Structure of the Protein Recombinational Landscape

JOURNAL ARTICLE published 4 October 2012 in PLoS Computational Biology

Authors: Philip A. Romero | Frances H. Arnold

Editors: Peter Joseph Artymiuk

https://doi.org/10.1371/journal.pcbi.1002713 Actions

Why Don't CD8+ T Cells Reduce the Lifespan of SIV-Infected Cells In Vivo?

JOURNAL ARTICLE published 29 September 2011 in PLoS Computational Biology

Authors: Marjet Elemans | Nafisa-Katrin Seich al Basatena | Nichole R. Klatt | Christos Gkekas | Guido Silvestri | Becca Asquith

Editors: Rob J. De Boer

https://doi.org/10.1371/journal.pcbi.1002200 Actions

Occurrence and Treatment of Bone Atrophic Non-Unions Investigated by an Integrative Approach

JOURNAL ARTICLE published 2 September 2010 in PLoS Computational Biology

Authors: Liesbet Geris | Anita A. C. Reed | Jos Vander Sloten | A. Hamish R. W. Simpson | Hans Van Oosterwyck

Editors: Philip E. Bourne

https://doi.org/10.1371/journal.pcbi.1000915 Actions

Analysis of protrusion dynamics in amoeboid cell motility by means of regularized contour flows

JOURNAL ARTICLE published 23 August 2021 in PLOS Computational Biology

Research funded by deutsche forschungsgemeinschaft (SFB1294/1 - 318763901) | deutsche forschungsgemeinschaft (SFB1294/1 - 318763901) | deutsche forschungsgemeinschaft (SFB1294/1 - 318763901)

Authors: Daniel Schindler | Ted Moldenhawer | Maike Stange | Valentino Lepro | Carsten Beta | Matthias Holschneider | Wilhelm Huisinga

Editors: Oleg A. Igoshin

https://doi.org/10.1371/journal.pcbi.1009268 Actions

Distal Loop Flexibility of a Regulatory Domain Modulates Dynamics and Activity of C-Terminal Src Kinase (Csk)

JOURNAL ARTICLE published 5 September 2013 in PLoS Computational Biology

Authors: Sulyman Barkho | Levi C. T. Pierce | Maria L. McGlone | Sheng Li | Virgil L. Woods | Ross C. Walker | Joseph A. Adams | Patricia A. Jennings

Editors: Michael Levitt

https://doi.org/10.1371/journal.pcbi.1003188 Actions

Inferring oscillatory modulation in neural spike trains

JOURNAL ARTICLE published 6 October 2017 in PLOS Computational Biology

Research funded by National Institute of Mental Health (MH064537)

Authors: Kensuke Arai | Robert E. Kass

Editors: Matthias Bethge

https://doi.org/10.1371/journal.pcbi.1005596 Actions

Neuronal Firing Sensitivity to Morphologic and Active Membrane Parameters

JOURNAL ARTICLE published 2005 in PLoS Computational Biology

Authors: Christina M Weaver | Susan Wearne

https://doi.org/10.1371/journal.pcbi.0040011.eor Actions

How to Grow a Computational Biology Lab

JOURNAL ARTICLE published 24 September 2015 in PLOS Computational Biology

Authors: Alice Carolyn McHardy

Editors: Theodore Alexandrov

https://doi.org/10.1371/journal.pcbi.1004397 Actions

“Simple Rules for Editors”? Here Is One Rule to Tackle Neglected Problems of Publishing: Response from PLoS

JOURNAL ARTICLE published 2007 in PLoS Computational Biology

Authors: Mark Patterson | Barbara Cohen

https://doi.org/10.1371/journal.pcbi.0030089 Actions

Correction: Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex

JOURNAL ARTICLE published 3 February 2016 in PLOS Computational Biology

Authors: The PLOS Computational Biology Staff

https://doi.org/10.1371/journal.pcbi.1004758 Actions
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