Kinome and phosphoproteome reprogramming underlies the aberrant immune responses in critically ill COVID-19 patients

JOURNAL ARTICLE published December 2024 in Clinical Proteomics

Research funded by Ontario Research Fund (COVID-19 Rapid Research Fund,COVID-19 Rapid Research Fund,COVID-19 Rapid Research Fund,COVID-19 Rapid Research Fund,COVID-19 Rapid Research Fund,COVID-19 Rapid Research Fund)

Authors: Tomonori Kaneko | Sally Ezra | Rober Abdo | Courtney Voss | Shanshan Zhong | Xuguang Liu | Owen Hovey | Marat Slessarev | Logan Robert Van Nynatten | Mingliang Ye | Douglas D. Fraser | Shawn Shun-Cheng Li

Deciphering the ovarian cancer ascites fluid peptidome

JOURNAL ARTICLE published December 2014 in Clinical Proteomics

Authors: Anand Bery | Felix Leung | Christopher R Smith | Eleftherios P Diamandis | Vathany Kulasingam

A comprehensive analysis of sialolith proteins and the clinical implications

JOURNAL ARTICLE published December 2020 in Clinical Proteomics

Research funded by LSU LIFT2 Grant: A proof-of-concept grant from the Louisiana State University Office of the President, managed through the LSU Research and Technology Foundation (LIFT-15A-7)

Authors: Carlos S. Busso | Jessie J. Guidry | Jhanis J. Gonzalez | Vassilia Zorba | Leslie S. Son | Peter J. Winsauer | Rohan R. Walvekar

Clinical proteomic analysis of scrub typhus infection

JOURNAL ARTICLE published December 2018 in Clinical Proteomics

Research funded by Ministry of Health and Welfare (HI16C0950) | Ministry of Science, ICT and Future Planning (CRC-16-01-KRICT) | Korea Basic Science Institute (D38402)

Authors: Edmond Changkyun Park | Sang-Yeop Lee | Sung Ho Yun | Chi-Won Choi | Hayoung Lee | Hyun Seok Song | Sangmi Jun | Gun-Hwa Kim | Chang-Seop Lee | Seung Il Kim

Identification of novel biomarker and therapeutic target candidates for acute intracerebral hemorrhage by quantitative plasma proteomics

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Research funded by The National Natural Science Foundation of China2014 (81373512)

Authors: Guo-chun Li | Lina Zhang | Ming Yu | Haiyu Jia | Ting Tian | Junqin Wang | Fuqiang Wang | Ling Zhou

Recent developments in mass-spectrometry-based targeted proteomics of clinical cancer biomarkers

JOURNAL ARTICLE published December 2024 in Clinical Proteomics

Research funded by Canadian Institutes of Health Research (PJT 173487)

Authors: Deborah Wenk | Charlotte Zuo | Thomas Kislinger | Lusia Sepiashvili

Freeze-dried plasma proteins are stable at room temperature for at least 1 year

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Authors: Jaimie Dufresne | Trung Hoang | Juliet Ajambo | Angelique Florentinus-Mefailoski | Peter Bowden | John Marshall

Analysis of the human serum proteome

JOURNAL ARTICLE published June 2004 in Clinical Proteomics

Authors: King C. Chan | David A. Lucas | Denise Hise | Carl F. Schaefer | Zhen Xiao | George M. Janini | Kenneth H. Buetow | Haleem J. Issaq | Timothy D. Veenstra | Thomas P. Conrads

Potential urine proteomics biomarkers for primary nephrotic syndrome

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Authors: Young Wook Choi | Yang Gyun Kim | Min-Young Song | Ju-Young Moon | Kyung-Hwan Jeong | Tae-Won Lee | Chun-Gyoo Ihm | Kang-Sik Park | Sang-Ho Lee

Proteomic signature associated with chronic kidney disease (CKD) progression identified by data-independent acquisition mass spectrometry

JOURNAL ARTICLE published December 2023 in Clinical Proteomics

Research funded by Medical Research Council (MR/R013942/1,MR/R013942/1,MR/R013942/1,MR/R013942/1,MR/R013942/1,MR/R013942/1,MR/R013942/1)

Authors: Carlos R. Ramírez Medina | Ibrahim Ali | Ivona Baricevic-Jones | Aghogho Odudu | Moin A. Saleem | Anthony D. Whetton | Philip A. Kalra | Nophar Geifman

Redefining serological diagnostics with immunoaffinity proteomics

JOURNAL ARTICLE published December 2023 in Clinical Proteomics

Research funded by University of Alberta (LMP Departmental Summer Studentship Stipend,FoMD Summer Studentship Award) | Canadian Institutes of Health Research (VR2-173207)

Authors: Jonathan Walter | Zicki Eludin | Andrei P. Drabovich

Proteomic discovery and verification of serum amyloid A as a predictor marker of patients at risk of post-stroke infection: a pilot study

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Authors: L. Azurmendi | V. Lapierre-Fetaud | J. Schneider | J. Montaner | M. Katan | Jean-Charles Sanchez

Acute-phase ITIH4 levels distinguish multi-system from single-system Langerhans cell histiocytosis via plasma peptidomics

JOURNAL ARTICLE published December 2015 in Clinical Proteomics

Authors: Ichiro Murakami | Yukiko Oh | Akira Morimoto | Hitoshi Sano | Susumu Kanzaki | Michiko Matsushita | Takeshi Iwasaki | Satoshi Kuwamoto | Masako Kato | Keiko Nagata | Kazuhiko Hayashi | Shinsaku Imashuku | Jean Gogusev | Francis Jaubert | Takashi Oka | Tadashi Yoshino

Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response

JOURNAL ARTICLE published December 2023 in Clinical Proteomics

Research funded by National Institute of Diabetes and Digestive and Kidney Diseases (U01 DK127786,U01 DK127505)

Authors: Soumyadeep Sarkar | Emily C. Elliott | Hayden R. Henry | Ivo Díaz Ludovico | John T. Melchior | Ashley Frazer-Abel | Bobbie-Jo Webb-Robertson | W. Sean Davidson | V. Michael Holers | Marian J. Rewers | Thomas O. Metz | Ernesto S. Nakayasu

Phospho-heavy-labeled-spiketide FAIMS stepped-CV DDA (pHASED) provides real-time phosphoproteomics data to aid in cancer drug selection

JOURNAL ARTICLE published December 2022 in Clinical Proteomics

Research funded by Zebra Investments (001) | NHMRC Ideas Grant (APP1188400) | NHMRC Targeted Research Grant (GA65801) | National Health and Medical Research Council (GNT1173892) | Cancer Institute NSW (MDD00487)

Authors: Dilana E. Staudt | Heather C. Murray | David A. Skerrett-Byrne | Nathan D. Smith | M. Fairuz B. Jamaluddin | Richard G. S. Kahl | Ryan J. Duchatel | Zacary P. Germon | Tabitha McLachlan | Evangeline R. Jackson | Izac J. Findlay | Padraic S. Kearney | Abdul Mannan | Holly P. McEwen | Alicia M. Douglas | Brett Nixon | Nicole M. Verrills | Matthew D. Dun

Validation of a blood protein signature for non-small cell lung cancer

JOURNAL ARTICLE published December 2014 in Clinical Proteomics

Authors: Michael R Mehan | Stephen A Williams | Jill M Siegfried | William L Bigbee | Joel L Weissfeld | David O Wilson | Harvey I Pass | William N Rom | Thomas Muley | Michael Meister | Wilbur Franklin | York E Miller | Edward N Brody | Rachel M Ostroff

The serum protein responses to treatment with Xiaoke Pill and Glibenclamide in type 2 diabetes patients

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Research funded by National Key Basic Research Program of China (No.2010CB912703) | National High Technology Research and Development Program of China (No.2006AA02A409) | Nature Science Foundation of China (Nature Science Foundation of China) | PKU People’s Hospital Research and development Funding (RD 2013-13)

Authors: Xiuying Zhang | Haidan Sun | Sanjoy K. Paul | Quanhui Wang | Xiaomin Lou | Guixue Hou | Bo Wen | Linong Ji | Siqi Liu

sBioSITe enables sensitive identification of the cell surface proteome through direct enrichment of biotinylated peptides

JOURNAL ARTICLE published December 2023 in Clinical Proteomics

Research funded by National Institutes of Health (U01CA271410)

Authors: Kishore Garapati | Husheng Ding | M. Cristine Charlesworth | Yohan Kim | Roman Zenka | Mayank Saraswat | Dong-Gi Mun | Sandip Chavan | Ashish Shingade | Fabrice Lucien | Jun Zhong | Richard K. Kandasamy | Akhilesh Pandey

Transcriptome profiling and proteomic validation reveals targets of the androgen receptor signaling in the BT-474 breast cancer cell line

JOURNAL ARTICLE published December 2022 in Clinical Proteomics

Authors: Stella K. Vasiliou | Panagiota S. Filippou | Sergi Clotet-Freixas | Antoninus Soosaipillai | Ihor Batruch | Foivos Viktor Tsianos | Ana Konvalinka | Eleftherios P. Diamandis

A proteomic approach to understanding the pathogenesis of idiopathic macular hole formation

JOURNAL ARTICLE published December 2017 in Clinical Proteomics

Research funded by National Institutes of Health (EY024596,AG027012)

Authors: Pingbo Zhang | Min Zhu | Yuming Zhao | Jiang Qian | Craig Dufresne | Randi Turner | Richard D. Semba | Sharon D. Solomon