Classifier Assessment and Feature Selection for Recognizing Short Coding Sequences of Human Genes

JOURNAL ARTICLE published March 2012 in Journal of Computational Biology

Authors: Kai Song | Ze Zhang | Tuo-Peng Tong | Fang Wu

Optimization Approaches for the In Silico Discovery of Optimal Targets for Gene Over/Underexpression

JOURNAL ARTICLE published February 2012 in Journal of Computational Biology

Authors: Emanuel Gonçalves | Rui Pereira | Isabel Rocha | Miguel Rocha

Smoothing 3D Protein Structure Motifs Through Graph Mining and Amino Acid Similarities

JOURNAL ARTICLE published February 2014 in Journal of Computational Biology

Authors: Wajdi Dhifli | Rabie Saidi | Engelbert Mephu Nguifo

Pathway Analysis of Microarray Data via Regression

JOURNAL ARTICLE published April 2008 in Journal of Computational Biology

Authors: A.J. Adewale | I. Dinu | J.D. Potter | Q. Liu | Y. Yasui

A Parameterized Algorithm for Protein Structure Alignment

JOURNAL ARTICLE published June 2007 in Journal of Computational Biology

Authors: Jinbo Xu | Feng Jiao | Bonnie Berger

RNA Locally Optimal Secondary Structures

JOURNAL ARTICLE published October 2012 in Journal of Computational Biology

Authors: Azadeh Saffarian | Mathieu Giraud | Antoine de Monte | Hélène Touzet

On the Complexity of Sparse Exon Assembly

JOURNAL ARTICLE published June 2006 in Journal of Computational Biology

Authors: Carmel Kent | Gad M. Landau | Michal Ziv-Ukelson

New Approach for Phylogenetic Tree Recovery Based on Genome-Scale Metabolic Networks

JOURNAL ARTICLE published July 2014 in Journal of Computational Biology

Authors: Daniel Gamermann | Arnaud Montagud | J. Alberto Conejero | Javier F. Urchueguía | Pedro Fernández de Córdoba

A Practical Approach to Significance Assessment in Alignment with Gaps

JOURNAL ARTICLE published March 2006 in Journal of Computational Biology

Authors: Nicholas Chia | Ralf Bundschuh

Approximate Multiple Protein Structure Alignment Using the Sum-of-Pairs Distance

JOURNAL ARTICLE published October 2004 in Journal of Computational Biology

Authors: Jieping Ye | Ravi Janardan

Folding Dynamics of Proteins from Denatured to Native State: Principal Component Analysis

JOURNAL ARTICLE published December 2004 in Journal of Computational Biology

Authors: Ahmet Palazoglu | Attila Gursoy | Yaman Arkun | Burak Erman

The Identification of Discriminating Patterns from 16S rRNA Gene to Generate Signature for Bacillus Genus

JOURNAL ARTICLE published August 2016 in Journal of Computational Biology

Authors: Ravi P. More | Hemant J. Purohit

Delaunay Tessellation of Proteins: Four Body Nearest-Neighbor Propensities of Amino Acid Residues

JOURNAL ARTICLE published January 1996 in Journal of Computational Biology

Authors: RAJ K. SINGH | ALEXANDER TROPSHA | IOSIF I. VAISMAN

Correlated Protein Function Prediction via Maximization of Data-Knowledge Consistency

JOURNAL ARTICLE published June 2015 in Journal of Computational Biology

Authors: Hua Wang | Heng Huang | Chris Ding

Pathway-Based Functional Analysis of Metagenomes

JOURNAL ARTICLE published March 2011 in Journal of Computational Biology

Authors: Itai Sharon | Sivan Bercovici | Ron Y. Pinter | Tomer Shlomi

Comparison of Additive Trees Using Circular Orders

JOURNAL ARTICLE published October 2000 in Journal of Computational Biology

Authors: Vladimir Makarenkov | Bruno Leclerc

An Algorithm to Enumerate Sorting Reversals for Signed Permutations

JOURNAL ARTICLE published June 2003 in Journal of Computational Biology

Authors: Adam C. Siepel

Polynomial-Time Algorithms for Building a Consensus MUL-Tree

JOURNAL ARTICLE published September 2012 in Journal of Computational Biology

Authors: Yun Cui | Jesper Jansson | Wing-Kin Sung

Protein Conformational Flexibility Analysis with Noisy Data

JOURNAL ARTICLE published September 2008 in Journal of Computational Biology

Authors: Anshul Nigham | David Hsu

On the Structure of Syntenic Distance

JOURNAL ARTICLE published February 2001 in Journal of Computational Biology

Authors: David Liben-Nowell