Rapid prediction of lab-grown tissue properties using deep learning

JOURNAL ARTICLE published 1 November 2023 in Physical Biology

Research funded by Science and Technology Facilities Council (Impact Accelerator Account)

Authors: Allison E Andrews | Hugh Dickinson | James P Hague

Wavelike propagation of quorum activation through a spatially distributed bacterial population under natural regulation

JOURNAL ARTICLE published 1 July 2021 in Physical Biology

Research funded by Division of Molecular and Cellular Biosciences (MCB 1715981)

Authors: Keval Patel | Coralis Rodriguez | Eric V Stabb | Stephen J Hagen

Microtubule catastrophe under force: mathematical and computational results from a Brownian ratchet model

JOURNAL ARTICLE published 1 January 2021 in Physical Biology

Authors: Vandana Yadav | Balaramamahanti Srinivas | Manoj Gopalakrishnan

Bayesian inference of the lung alveolar spatial model for the identification of alveolar mechanics associated with acute respiratory distress syndrome

JOURNAL ARTICLE published 18 April 2013 in Physical Biology

Authors: Scott Christley | Bryanna Emr | Auyon Ghosh | Josh Satalin | Louis Gatto | Yoram Vodovotz | Gary F Nieman | Gary An

A simple cognitive model explains movement decisions in zebrafish while following leaders

JOURNAL ARTICLE published 1 July 2023 in Physical Biology

Research funded by HORIZON EUROPE Marie Sklodowska-Curie Actions (#860949) | Office of Naval Research (EXC 2117–422037984) | Germany’s Excellence Strategy (EXC 2117–422037984)

Authors: Lital Oscar | Liang Li | Dan Gorbonos | Iain D Couzin | Nir S Gov

Growth instabilities shape morphology and genetic diversity of microbial colonies

JOURNAL ARTICLE published 1 September 2022 in Physical Biology

Research funded by NIGMS (1R01GM138530-01) | Simons Foundation (409704) | NIH (R21CA260382) | Human Frontiers Science Program (RGP0060/2021) | Functional Evaluation in Soils Science Focus Area Program (DE-AC02-05CH11231)

Authors: Alexander Golden | Ilija Dukovski | Daniel Segrè | Kirill S Korolev

Chaperone-assisted translocation

JOURNAL ARTICLE published June 2004 in Physical Biology

Authors: Tobias Ambjörnsson | Ralf Metzler

An introduction to cell motility for the physical scientist

JOURNAL ARTICLE published March 2004 in Physical Biology

Authors: Daniel A Fletcher | Julie A Theriot

Proofreading of misincorporated nucleotides in DNA transcription

JOURNAL ARTICLE published 1 June 2012 in Physical Biology

Authors: Margaritis Voliotis | Netta Cohen | Carmen Molina-París | Tanniemola B Liverpool

Modeling the repair of DNA strand breaks caused by γ-radiation in a minichromosome

JOURNAL ARTICLE published 30 July 2014 in Physical Biology

Authors: K Łakomiec | S Kumala | R Hancock | J Rzeszowska-Wolny | K Fujarewicz

Computational modelling of multi-cell migration in a multi-signalling substrate

JOURNAL ARTICLE published 17 March 2014 in Physical Biology

Authors: Seyed Jamaleddin Mousavi | Manuel Doblaré | Mohamed Hamdy Doweidar

Modeling self-organized spatio-temporal patterns of PIP₃and PTEN during spontaneous cell polarization

JOURNAL ARTICLE published 15 July 2014 in Physical Biology

Authors: Fabian Knoch | Marco Tarantola | Eberhard Bodenschatz | Wouter-Jan Rappel

Analysis of precision in chemical oscillators: implications for circadian clocks

JOURNAL ARTICLE published 16 September 2013 in Physical Biology

Authors: Thomas d'Eysmond | Alessandro De Simone | Felix Naef

Seeking and sharing information in collective olfactory search

JOURNAL ARTICLE published 1 November 2023 in Physical Biology

Research funded by H2020 Marie Skłodowska-Curie Actions (956457)

Authors: Emanuele Panizon | Antonio Celani

Spontaneous genetic clustering in populations of competing organisms

JOURNAL ARTICLE published 1 December 2012 in Physical Biology

Authors: Tim Rogers | Alan J McKane | Axel G Rossberg

Branching and capping determine the force–velocity relationships of branching actin networks

JOURNAL ARTICLE published 28 January 2013 in Physical Biology

Authors: Daniel B Smith | Jian Liu

Dynamics of a stochastic spatially extended system predicted by comparing deterministic and stochastic attractors of the corresponding birth–death process

JOURNAL ARTICLE published 1 October 2012 in Physical Biology

Authors: Pawel J Zuk | Marek Kochańczyk | Joanna Jaruszewicz | Witold Bednorz | Tomasz Lipniacki

A simple biosynthetic pathway for large product generation from small substrate amounts

JOURNAL ARTICLE published 1 October 2012 in Physical Biology

Authors: Marko Djordjevic | Magdalena Djordjevic

On the power per mitochondrion and the number of associated active ATP synthases

JOURNAL ARTICLE published 1 July 2021 in Physical Biology

Research funded by Natural Sciences and Engineering Research Council of Canada (DG-2015) | Canada Foundation for Innovation (Leaders Opportunity Fund 2008 & 2020)

Authors: Peyman Fahimi | Chérif F Matta

The dynamics of p53 in single cells: physiologically based ODE and reaction–diffusion PDE models

JOURNAL ARTICLE published 30 July 2014 in Physical Biology

Authors: Ján Eliaš | Luna Dimitrio | Jean Clairambault | Roberto Natalini