Mapping Tyrosine Kinases Based on a TK Activity-Representing Peptide Library Reveals a Role for SRC in H1975 Drug Resistance

JOURNAL ARTICLE published 1 April 2022 in Journal of Proteome Research

Research funded by National Natural Science Foundation of China (31670781) | Natural Science Foundation of Shaanxi Province (2017JM3027)

Authors: Zhanwu Hou | Caiting Meng | Fei Yang | Yujiao Deng | Xiao Han | Huadong Liu

Targeted Metabolomics Reveals a Protective Role for Basal PPARα in Cholestasis Induced by α-Naphthylisothiocyanate

JOURNAL ARTICLE published 6 April 2018 in Journal of Proteome Research

Research funded by National Natural Science Foundation of China (81273582,81302848)

Authors: Manyun Dai | Huiying Hua | Hante Lin | Gangming Xu | Xiaowei Hu | Fei Li | Frank J. Gonzalez | Aiming Liu | Julin Yang

Discovery of a Novel B-Raf Fusion Protein Related to c-Met Drug Resistance

JOURNAL ARTICLE published 4 November 2011 in Journal of Proteome Research

Authors: Roslyn Dillon | Carol L. Nilsson | Stone D.-H Shi | Nathan V. Lee | Bryan Krastins | Michael J. Greig

Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics

JOURNAL ARTICLE published 2 September 2022 in Journal of Proteome Research

Research funded by National Institutes of Health (DK121409,P41 GM103533,U01DA040707)

Authors: Li-Chun Cheng | Xi Zhang | Kanishk Abhinav | Julie A Nguyen | Sabyasachi Baboo | Salvador Martinez-Bartolomé | Tess C Branon | Alice Y Ting | Esther Loose | John R Yates | Larry Gerace

Composition of Rosenthal Fibers, the Protein Aggregate Hallmark of Alexander Disease

JOURNAL ARTICLE published 1 July 2016 in Journal of Proteome Research

Research funded by National Institute of Neurological Disorders and Stroke (P01NS42803) | National Institute of General Medical Sciences (2T32GM008111)

Authors: Michael R. Heaven | Daniel Flint | Shan M. Randall | Alexander A. Sosunov | Landon Wilson | Stephen Barnes | James E. Goldman | David C. Muddiman | Michael Brenner

Application of Saturation Dye 2D-DIGE Proteomics to Characterize Proteins Modulated by Oxidized Low Density Lipoprotein Treatment of Human Macrophages

JOURNAL ARTICLE published 1 August 2008 in Journal of Proteome Research

Authors: Annabelle Dupont | Maggy Chwastyniak | Olivia Beseme | Anne-Laure Guihot | Hervé Drobecq | Philippe Amouyel | Florence Pinet

Proteomic Analysis of Microvesicles Derived from Human Colorectal Cancer Cells

JOURNAL ARTICLE published 1 December 2007 in Journal of Proteome Research

Authors: Dong-Sic Choi | Jae-Min Lee | Gun Wook Park | Hyeon-Woo Lim | Joo Young Bang | Yoon-Keun Kim | Kyung-Hoon Kwon | Ho Jeong Kwon | Kwang Pyo Kim | Yong Song Gho

Challenging Targets or Describing Mismatches? A Comment on Common Decoy Distribution by Madej et al.

JOURNAL ARTICLE published 2 December 2022 in Journal of Proteome Research

Research funded by Agence Nationale de la Recherche (ANR-10-INBS-08,ANR-10-LABX49-01,ANR-19-P3IA-0003)

Authors: Lucas Etourneau | Thomas Burger

Application of Fluorescence Difference Gel Electrophoresis Technology in Searching for Protein Biomarkers in Chick Myopia

JOURNAL ARTICLE published 1 November 2007 in Journal of Proteome Research

Authors: Thomas C. Lam | King-Kit Li | Samuel C. L. Lo | Jeremy A. Guggenheim | Chi Ho To

QuatIdent: A Web Server for Identifying Protein Quaternary Structural Attribute by Fusing Functional Domain and Sequential Evolution Information

JOURNAL ARTICLE published 6 March 2009 in Journal of Proteome Research

Authors: Hong-Bin Shen | Kuo-Chen Chou

Ran GTPase Regulates Hemocytic Phagocytosis of Shrimp by Interaction with Myosin

JOURNAL ARTICLE published 6 March 2009 in Journal of Proteome Research

Authors: Weifeng Liu | Fang Han | Xiaobo Zhang

A Novel Metabolic Signature To Predict the Requirement of Dialysis or Renal Transplantation in Patients with Chronic Kidney Disease

JOURNAL ARTICLE published 5 April 2019 in Journal of Proteome Research

Research funded by Bundesministerium f?r Bildung und Forschung (01 ER 0821) | Deutsche Forschungsgemeinschaft (387509280,SFB1350)

Authors: Helena U. Zacharias | Michael Altenbuchinger | Ulla T. Schultheiss | Claudia Samol | Fruzsina Kotsis | Inga Poguntke | Peggy Sekula | Jan Krumsiek | Anna Köttgen | Rainer Spang | Peter J. Oefner | Wolfram Gronwald

Exploring Novel Function of Yeast Ssa1/2p by Quantitative Profiling Proteomics Using NanoESI-LC−MS/MS

JOURNAL ARTICLE published 1 September 2007 in Journal of Proteome Research

Authors: Rena Matsumoto | Hyung Wook Nam | Ganesh Kumar Agrawal | Yu Sam Kim | Hitoshi Iwahashi | Randeep Rakwal

Intestinal Amino Acid Availability via PEPT-1 Affects TORC1/2 Signaling and the Unfolded Protein Response

JOURNAL ARTICLE published 1 August 2014 in Journal of Proteome Research

Authors: Kerstin E. Geillinger | Katja Kuhlmann | Martin Eisenacher | Pieter Giesbertz | Helmut E. Meyer | Hannelore Daniel | Britta Spanier

Analysis of TRPC3-Interacting Proteins by Tandem Mass Spectrometry

JOURNAL ARTICLE published 1 March 2008 in Journal of Proteome Research

Authors: Timothy Lockwich | Jaya Pant | Anthony Makusky | Ewa Jankowska-Stephens | Jeffrey A. Kowalak | Sanford P. Markey | Indu S. Ambudkar

Combination of Bottom-up 2D-LC-MS and Semi-top-down GelFree-LC-MS Enhances Coverage of Proteome and Low Molecular Weight Short Open Reading Frame Encoded Peptides of the Archaeon Methanosarcina mazei

JOURNAL ARTICLE published 7 October 2016 in Journal of Proteome Research

Research funded by Deutsche Forschungsgemeinschaft (Cluster of Excellence Inflammation at Interfaces,Schm1052/9-2,SFB 1182)

Authors: Liam Cassidy | Daniela Prasse | Dennis Linke | Ruth A. Schmitz | Andreas Tholey

Systematic Comparison of Strategies for the Enrichment of Lysosomes by Data Independent Acquisition

JOURNAL ARTICLE published 3 January 2020 in Journal of Proteome Research

Research funded by Deutsche Forschungsgemeinschaft (FOR2625)

Authors: Jasjot Singh | Edgar Kaade | Jan Muntel | Roland Bruderer | Lukas Reiter | Melanie Thelen | Dominic Winter

The Low Molecular Weight Proteome of Halobacterium salinarum

JOURNAL ARTICLE published 1 April 2007 in Journal of Proteome Research

Authors: Christian Klein | Michalis Aivaliotis | Jesper V. Olsen | Michaela Falb | Hüseyin Besir | Beatrix Scheffer | Birgit Bisle | Andreas Tebbe | Kosta Konstantinidis | Frank Siedler | Friedhelm Pfeiffer | Matthias Mann | Dieter Oesterhelt

Characterization of Post-Translational Modifications of the Linker Histones H1 and H5 from Chicken Erythrocytes Using Mass Spectrometry

JOURNAL ARTICLE published 3 October 2008 in Journal of Proteome Research

Authors: Ambrosius P. L. Snijders | Sayampong Pongdam | Stan J. Lambert | Christopher M. Wood | John P. Baldwin | Mark J. Dickman

Comparative Proteomic Analysis of Auxin-Induced Embryogenic and Nonembryogenic Tissues of the Solanaceous Tree Cyphomandra betacea (Tamarillo)

JOURNAL ARTICLE published 2 March 2012 in Journal of Proteome Research

Authors: Sandra Correia | Raquel Vinhas | Bruno Manadas | Ana Sofia Lourenço | Paula Veríssimo | Jorge M. Canhoto