Multiple Testing Issues in Discriminating Compound-Related Peaks and Chromatograms from High Frequency Noise, Spikes and Solvent-Based Noise in LC - MS Data Sets

JOURNAL ARTICLE published 8 January 2007 in Statistical Applications in Genetics and Molecular Biology

Authors: Stephen O Nyangoma | Antoine A. H. C. van Kampen | Theo H Reijmers | Natalia I Govorukhina | Ate G. J. van der Zee | Lucinda J Billingham | Rainer Bischoff | Ritsert C. Jansen

Special Issue on Computational Statistical Methods for Genomics and Systems Biology

JOURNAL ARTICLE published 6 January 2012 in Statistical Applications in Genetics and Molecular Biology

Authors: Aurélie Labbe | Sandrine Dudoit

An extended model for phylogenetic maximum likelihood based on discrete morphological characters

JOURNAL ARTICLE published 20 February 2020 in Statistical Applications in Genetics and Molecular Biology

Authors: David A. Spade

Pattern Classification of Phylogeny Signals

JOURNAL ARTICLE published 17 January 2008 in Statistical Applications in Genetics and Molecular Biology

Authors: Xiaofei Shi | Hong Gu | Chris Field

A Heuristic Bayesian Method for Segmenting DNA Sequence Alignments and Detecting Evidence for Recombination and Gene Conversion

JOURNAL ARTICLE published 24 January 2006 in Statistical Applications in Genetics and Molecular Biology

Authors: Anna Kedzierska | Dirk Husmeier

A New Type of Stochastic Dependence Revealed in Gene Expression Data

JOURNAL ARTICLE published 6 January 2006 in Statistical Applications in Genetics and Molecular Biology

Authors: Lev Klebanov | Craig Jordan | Andrei Yakovlev

Validation in Genomics: CpG Island Methylation Revisited

JOURNAL ARTICLE published 26 January 2006 in Statistical Applications in Genetics and Molecular Biology

Authors: Mark R Segal

Discrete Wavelet Packet Transform Based Discriminant Analysis for Whole Genome Sequences

JOURNAL ARTICLE published 24 April 2019 in Statistical Applications in Genetics and Molecular Biology

Research funded by NIH (1R01AG054621-01)

Authors: Hsin-Hsiung Huang | Senthil Balaji Girimurugan

Non-parametric estimation of population size changes from the site frequency spectrum

JOURNAL ARTICLE published 27 June 2018 in Statistical Applications in Genetics and Molecular Biology

Research funded by Lundbeck Foundation (R155–2014–1724)

Authors: Berit Lindum Waltoft | Asger Hobolth

An Empirical Bayes approach for the identification of long-range chromosomal interaction from Hi-C data

JOURNAL ARTICLE published 21 April 2021 in Statistical Applications in Genetics and Molecular Biology

Research funded by Division of Biological Infrastructure (1564621) | Office of Integrative Activities (1736192)

Authors: Qi Zhang | Zheng Xu | Yutong Lai

AdaReg: data adaptive robust estimation in linear regression with application in GTEx gene expressions

JOURNAL ARTICLE published 23 July 2021 in Statistical Applications in Genetics and Molecular Biology

Authors: Meng Wang | Lihua Jiang | Michael P. Snyder

Dimension Reduction for Classification with Gene Expression Microarray Data

JOURNAL ARTICLE published 24 January 2006 in Statistical Applications in Genetics and Molecular Biology

Authors: Jian J Dai | Linh Lieu | David Rocke

Modeling Read Counts for CNV Detection in Exome Sequencing Data

JOURNAL ARTICLE published 8 January 2011 in Statistical Applications in Genetics and Molecular Biology

Authors: Michael I. Love | Alena Myšičková | Ruping Sun | Vera Kalscheuer | Martin Vingron | Stefan A. Haas

CAT PETR: a graphical user interface for differential analysis of phosphorylation and expression data

JOURNAL ARTICLE published 27 January 2023 in Statistical Applications in Genetics and Molecular Biology

Authors: Keegan Flanagan | Steven Pelech | Yossef Av-Gay | Khanh Dao Duc

Frontmatter

JOURNAL ARTICLE published 21 April 2021 in Statistical Applications in Genetics and Molecular Biology

Measuring evolutionary cancer dynamics from genome sequencing, one patient at a time

JOURNAL ARTICLE published 29 December 2020 in Statistical Applications in Genetics and Molecular Biology

Authors: Giulio Caravagna

Finding causative genes from high-dimensional data: an appraisal of statistical and machine learning approaches

JOURNAL ARTICLE published 1 August 2016 in Statistical Applications in Genetics and Molecular Biology

Authors: Chamont Wang | Jana L. Gevertz

Spectral dynamic causal modelling of resting-state fMRI: an exploratory study relating effective brain connectivity in the default mode network to genetics

JOURNAL ARTICLE published 7 September 2020 in Statistical Applications in Genetics and Molecular Biology

Research funded by National Institutes of Health (U01 AG024904) | Department of Defense (W81XWH-12-2-0012)

Authors: Yunlong Nie | Eugene Opoku | Laila Yasmin | Yin Song | Jie Wang | Sidi Wu | Vanessa Scarapicchia | Jodie Gawryluk | Liangliang Wang | Jiguo Cao | Farouk S. Nathoo

A fast and efficient approach for gene-based association studies of ordinal phenotypes

JOURNAL ARTICLE published 27 January 2023 in Statistical Applications in Genetics and Molecular Biology

Research funded by National Natural Science Foundation of China (61873087,12071114) | Natural Science Foundation of Heilongjiang Province (LH2019A020)

Authors: Nanxing Li | Lili Chen | Yajing Zhou | Qianran Wei

False discovery control for penalized variable selections with high-dimensional covariates

JOURNAL ARTICLE published 19 December 2018 in Statistical Applications in Genetics and Molecular Biology

Research funded by Chinese Natural Science Foundation (11528102)

Authors: Kevin He | Xiang Zhou | Hui Jiang | Xiaoquan Wen | Yi Li