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Bioinformatics process management: information flow via a computational journal JOURNAL ARTICLE published December 2007 in Source Code for Biology and Medicine |
Creating web applications for spatial epidemiological analysis and mapping in R using Rwui JOURNAL ARTICLE published December 2011 in Source Code for Biology and Medicine |
Flow: Statistics, visualization and informatics for flow cytometry JOURNAL ARTICLE published December 2008 in Source Code for Biology and Medicine |
CADLIVE optimizer: web-based parameter estimation for dynamic models JOURNAL ARTICLE published December 2012 in Source Code for Biology and Medicine |
Implementing a new EPR lineshape parameter for organic radicals in carbonaceous matter JOURNAL ARTICLE published December 2013 in Source Code for Biology and Medicine |
Methylation plotter: a web tool for dynamic visualization of DNA methylation data JOURNAL ARTICLE published December 2014 in Source Code for Biology and Medicine |
ROVER variant caller: read-pair overlap considerate variant-calling software applied to PCR-based massively parallel sequencing datasets JOURNAL ARTICLE published December 2014 in Source Code for Biology and Medicine |
Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images JOURNAL ARTICLE published December 2016 in Source Code for Biology and Medicine Research funded by Science Foundation Ireland (09/IN.1/B2604) | Irish Research Council for Science, Engineering and Technology (NA) |
PrimerView: high-throughput primer design and visualization JOURNAL ARTICLE published December 2015 in Source Code for Biology and Medicine |
PageRank as a method to rank biomedical literature by importance JOURNAL ARTICLE published December 2015 in Source Code for Biology and Medicine |
Annokey: an annotation tool based on key term search of the NCBI Entrez Gene database JOURNAL ARTICLE published December 2014 in Source Code for Biology and Medicine |
The Multiscale Systems Immunology project: software for cell-based immunological simulation JOURNAL ARTICLE published December 2008 in Source Code for Biology and Medicine |
IHE cross-enterprise document sharing for imaging: interoperability testing software JOURNAL ARTICLE published December 2010 in Source Code for Biology and Medicine |
A traveling salesman approach for predicting protein functions JOURNAL ARTICLE published December 2006 in Source Code for Biology and Medicine |
Open source tool for prediction of genome wide protein-protein interaction network based on ortholog information JOURNAL ARTICLE published December 2010 in Source Code for Biology and Medicine |
FLIM-FRET analyzer: open source software for automation of lifetime-based FRET analysis JOURNAL ARTICLE published December 2017 in Source Code for Biology and Medicine Research funded by National Research Foundation of Korea (2012R1A1A2004980,2015R1D1A1A09057239,2014K1A4A7A01074642,2017M3A9G6068257) |
Membrainy: a ‘smart’, unified membrane analysis tool JOURNAL ARTICLE published December 2015 in Source Code for Biology and Medicine |
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments JOURNAL ARTICLE published December 2012 in Source Code for Biology and Medicine |
Second generation registry framework JOURNAL ARTICLE published December 2014 in Source Code for Biology and Medicine |
MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads JOURNAL ARTICLE published December 2012 in Source Code for Biology and Medicine |