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Ordering Protein Contact Matrices

JOURNAL ARTICLE published 2018 in Computational and Structural Biotechnology Journal

Research funded by European Union (FP7-IDEAS-ERC 294809)

Authors: Chuan Xu | Guillaume Bouvier | Benjamin Bardiaux | Michael Nilges | Thérèse Malliavin | Abdel Lisser

Chimeric mitochondrial peptides from contiguous regular and swinger RNA

JOURNAL ARTICLE published 2016 in Computational and Structural Biotechnology Journal

Research funded by A*MIDEX project (ANR-11-IDEX-0001-02)

Authors: Hervé Seligmann

Landscape inferred from gene expression data governs pluripotency in embryonic stem cells

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Authors: Xin Kang | Chunhe Li

Plasma lipidomic biomarker analysis reveals distinct lipid changes in vascular dementia

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Authors: Yue Liu | Daniel K.Y. Chan | Anbupalam Thalamuthu | Wei Wen | Jiyang Jiang | Matthew Paradise | Teresa Lee | John Crawford | Matthew Wai Kin Wong | Ying Hua Xu | Anne Poljak | Russell Pickford | Perminder S. Sachdev | Nady Braidy

SigTree : A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree

JOURNAL ARTICLE published 2017 in Computational and Structural Biotechnology Journal

Authors: John R. Stevens | Todd R. Jones | Michael Lefevre | Balasubramanian Ganesan | Bart C. Weimer

Genome-wide noninvasive prenatal diagnosis of monogenic disorders: Current and future trends

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Authors: Tom Rabinowitz | Noam Shomron

Artificial intelligence in clinical care amidst COVID-19 pandemic: A systematic review

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Eleni S. Adamidi | Konstantinos Mitsis | Konstantina S. Nikita

APPROACHES TO ENGINEER STABILITY OF BEETLE LUCIFERASES

JOURNAL ARTICLE published September 2012 in Computational and Structural Biotechnology Journal

Research funded by Russian Foundation for Basic Research ((grant 08-04-00624 and 11-04-00698))

Authors: Mikhail I. Koksharov | Natalia N. Ugarova

Improved cluster ranking in protein–protein docking using a regression approach

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Research funded by National Institute of General Medical Sciences (R21GM127952,RM1135136) | National Science Foundation (AF 1645512,CNS-1645681,DBI 1759277,DMS-1664644,IIS-1914792) | National Institutes of Health (R01 GM135930,R35 GM118078,UL54 TR004130) | Office of Naval Research (N00014-19-1-2571) | U.S. Department of Energy (DE-AR-0001282)

Authors: Shahabeddin Sotudian | Israel T. Desta | Nasser Hashemi | Shahrooz Zarbafian | Dima Kozakov | Pirooz Vakili | Sandor Vajda | Ioannis Ch. Paschalidis

Early Vascular Ageing and Cellular Senescence in Chronic Kidney Disease

JOURNAL ARTICLE published 2019 in Computational and Structural Biotechnology Journal

Research funded by Karolinska Institutet (2009-1068) | European Union‘s Horizon 2020 research and innovation Program (722609)

Authors: Lu Dai | Abdul Rashid Qureshi | Anna Witasp | Bengt Lindholm | Peter Stenvinkel

Metabolomics and biochemical assays reveal the metabolic responses to hypo-salinity stress and osmoregulatory role of cAMP-PKA pathway in Mercenaria mercenaria

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Cong Zhou | Hao Song | Jie Feng | Zhi Hu | Mei-jie Yang | Pu Shi | Yong-ren Li | Yong-jun Guo | Hai-zhou Li | Tao Zhang

ggVolcanoR: A Shiny app for customizable visualization of differential expression datasets

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Kerry A. Mullan | Liesl M. Bramberger | Prithvi Raj Munday | Gabriel Goncalves | Jerico Revote | Nicole A. Mifsud | Patricia T. Illing | Alison Anderson | Patrick Kwan | Anthony W. Purcell | Chen Li

ENGINEERING NON-HEME MONO- AND DIOXYGENASES FOR BIOCATALYSIS

JOURNAL ARTICLE published September 2012 in Computational and Structural Biotechnology Journal

Authors: Adi Dror | Ayelet Fishman

CRISPR/Cas9 based genome editing for targeted transcriptional control in triple-negative breast cancer

JOURNAL ARTICLE published 2021 in Computational and Structural Biotechnology Journal

Authors: Desh Deepak Singh | Ihn Han | Eun-Ha Choi | Dharmendra Kumar Yadav

Fever temperatures modulate intraprotein dynamics and enhance the binding affinity between monoclonal antibodies and the spike protein from SARS-CoV-2

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Research funded by National Supercomputing Center, Korea Institute of Science and Technology Information (KSC-2020-CRE-0203) | Chonnam National University (2022-2574)

Authors: Dong Gun Kim | Hak Sung Kim | Yoonjoo Choi | Razvan Costin Stan

BioVisReport: A Markdown-based lightweight website builder for reproducible and interactive visualization of results from peer-reviewed publications

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Jingcheng Yang | Yaqing Liu | Jun Shang | Yechao Huang | Ying Yu | Zhihui Li | Leming Shi | Zihan Ran

Recent progress in structural studies on TMEM16A channel

JOURNAL ARTICLE published 2020 in Computational and Structural Biotechnology Journal

Authors: Sai Shi | Chunli Pang | Shuai Guo | Yafei Chen | Biao Ma | Chang Qu | Qiushuang Ji | Hailong An

Comprehensive characterization of human–virus protein-protein interactions reveals disease comorbidities and potential antiviral drugs

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Si Li | Weiwei Zhou | Donghao Li | Tao Pan | Jing Guo | Haozhe Zou | Zhanyu Tian | Kongning Li | Juan Xu | Xia Li | Yongsheng Li

Classifying breast cancer and fibroadenoma tissue biopsies from paraffined stain-free slides by fractal biomarkers in Fourier Ptychographic Microscopy

JOURNAL ARTICLE published December 2024 in Computational and Structural Biotechnology Journal

Authors: Vittorio Bianco | Marika Valentino | Daniele Pirone | Lisa Miccio | Pasquale Memmolo | Valentina Brancato | Luigi Coppola | Giovanni Smaldone | Massimiliano D’Aiuto | Gennaro Mossetti | Marco Salvatore | Pietro Ferraro

Using molecular dynamics simulations to interrogate T cell receptor non-equilibrium kinetics

JOURNAL ARTICLE published 2022 in Computational and Structural Biotechnology Journal

Authors: Zachary A. Rollins | Roland Faller | Steven C. George