The High-Pressure Freezing Laboratory for Macromolecular Crystallography (HPMX), an ancillary tool for the macromolecular crystallography beamlines at the ESRF

JOURNAL ARTICLE published 1 February 2024 in Acta Crystallographica Section D Structural Biology

Authors: Philippe Carpentier | Peter van der Linden | Christoph Mueller-Dieckmann

Impact of the crystallization condition on importin-β conformation

JOURNAL ARTICLE published 1 June 2016 in Acta Crystallographica Section D Structural Biology

Authors: Marcel J. Tauchert | Clément Hémonnot | Piotr Neumann | Sarah Köster | Ralf Ficner | Achim Dickmanns

VitroJet: new features and case studies

JOURNAL ARTICLE published 1 April 2024 in Acta Crystallographica Section D Structural Biology

Research funded by National Institutes of Health (U24GM129547) | Vetenskapsrådet (2018-05851) | HORIZON EUROPE European Research Council (10117204)

Authors: Rene J. M. Henderikx | Daniel Mann | Aušra Domanska | Jing Dong | Saba Shahzad | Behnam Lak | Aikaterini Filopoulou | Damian Ludig | Martin Grininger | Jeffrey Momoh | Elina Laanto | Hanna M. Oksanen | Kyrylo Bisikalo | Pamela A. Williams | Sarah J. Butcher | Peter J. Peters | Bart W. A. M. M. Beulen

Ligand complex structures in protein crystallography

JOURNAL ARTICLE published 1 February 2017 in Acta Crystallographica Section D Structural Biology

Authors: Judit É. Debreczeni | Paul Emsley

PRISM-EM: template interface-based modelling of multi-protein complexes guided by cryo-electron microscopy density maps. Corrigendum

JOURNAL ARTICLE published 1 January 2018 in Acta Crystallographica Section D Structural Biology

Authors: Guray Kuzu | Ozlem Keskin | Ruth Nussinov | Attila Gursoy

Structure of TSA2 reveals novel features of the active-site loop of peroxiredoxins

JOURNAL ARTICLE published 1 January 2016 in Acta Crystallographica Section D Structural Biology

Authors: Maja Holch Nielsen | Rune Thomas Kidmose | Lasse Bohl Jenner

Structure of the conservedFrancisellavirulence protein FvfA

JOURNAL ARTICLE published 1 October 2017 in Acta Crystallographica Section D Structural Biology

Research funded by Canadian Institutes of Health Research, Institute of Infection and Immunity (MOP 89812,MOP 125959)

Authors: Subramania Kolappan | Karen Y. Lo | Chiao Ling Jennifer Shen | Julian A. Guttman | Lisa Craig

A substrate selected by phage display exhibits enhanced side-chain hydrogen bonding to HIV-1 protease

JOURNAL ARTICLE published 1 July 2018 in Acta Crystallographica Section D Structural Biology

Research funded by National Institutes of Health (R01 GM044783,T32 GM008349)

Authors: Ian W. Windsor | Ronald T. Raines

Structures of permuted halves of a modern ribose-binding protein

JOURNAL ARTICLE published 1 January 2023 in Acta Crystallographica Section D Structural Biology

Research funded by H2020 European Research Council (647548) | Volkswagen Foundation (94747)

Authors: Florian Michel | Sooruban Shanmugaratnam | Sergio Romero-Romero | Birte Höcker

Two particle-picking procedures for filamentous proteins: SPHIRE-crYOLO filament mode and SPHIRE-STRIPER

JOURNAL ARTICLE published 1 July 2020 in Acta Crystallographica Section D Structural Biology

Authors: Thorsten Wagner | Luca Lusnig | Sabrina Pospich | Markus Stabrin | Fabian Schönfeld | Stefan Raunser

The use of local structural similarity of distant homologues for crystallographic model building from a molecular-replacement solution

JOURNAL ARTICLE published 1 March 2020 in Acta Crystallographica Section D Structural Biology

Research funded by Horizon 2020 (EINFRA-2015-1-675858)

Authors: Grzegorz Chojnowski | Koushik Choudhury | Philipp Heuser | Egor Sobolev | Joana Pereira | Umut Oezugurel | Victor S. Lamzin

Protein structure determination by electron diffraction using a single three-dimensional nanocrystal

JOURNAL ARTICLE published 1 September 2017 in Acta Crystallographica Section D Structural Biology

Authors: M. T. B. Clabbers | E. van Genderen | W. Wan | E. L. Wiegers | T. Gruene | J. P. Abrahams

On bias, variance, overfitting, gold standard and consensus in single-particle analysis by cryo-electron microscopy

JOURNAL ARTICLE published 1 April 2022 in Acta Crystallographica Section D Structural Biology

Authors: C. O. S. Sorzano | A. Jiménez-Moreno | D. Maluenda | M. Martínez | E. Ramírez-Aportela | J. Krieger | R. Melero | A. Cuervo | J. Conesa | J. Filipovic | P. Conesa | L. del Caño | Y. C. Fonseca | J. Jiménez-de la Morena | P. Losana | R. Sánchez-García | D. Strelak | E. Fernández-Giménez | F. P. de Isidro-Gómez | D. Herreros | J. L. Vilas | R. Marabini | J. M. Carazo

Shake-it-off: a simple ultrasonic cryo-EM specimen-preparation device

JOURNAL ARTICLE published 1 December 2019 in Acta Crystallographica Section D Structural Biology

Research funded by Natural Sciences and Engineering Research Council of Canada (Discovery Grant) | Canadian Institutes of Health Research, Institute of Genetics (Doctoral Research Award) | Hospital for Sick Children (ResTraComp fellowship)

Authors: John L. Rubinstein | Hui Guo | Zev A. Ripstein | Ali Haydaroglu | Aaron Au | Christopher M. Yip | Justin M. Di Trani | Samir Benlekbir | Timothy Kwok

Density modification of cryo-EM maps

JOURNAL ARTICLE published 1 October 2020 in Acta Crystallographica Section D Structural Biology

Research funded by National Institutes of Health, National Institute of General Medical Sciences (P01GM063210) | U.S. Department of Energy (DE-AC02-05CH11231) | Wellcome Trust (209407/Z/17/Z)

Authors: Thomas C. Terwilliger | Oleg V. Sobolev | Pavel V. Afonine | Paul D. Adams | Randy J. Read

Intracellular drug binding affinities by NMR

JOURNAL ARTICLE published 1 October 2021 in Acta Crystallographica Section D Structural Biology

Research funded by Austrian Science Fund (P28854,I3792,DK-MCD W1226,DOC-130) | Österreichische Forschungsförderungsgesellschaft (864690,870454)

Authors: Tobias Madl

Structure of the cyanobactin oxidase ThcOx fromCyanothecesp. PCC 7425, the first structure to be solved at Diamond Light Source beamline I23 by means of S-SAD

JOURNAL ARTICLE published 1 November 2016 in Acta Crystallographica Section D Structural Biology

Research funded by Biotechnology and Biological Sciences Research Council (BB/K015508/1)

Authors: Andrew F. Bent | Greg Mann | Wael E. Houssen | Vitaliy Mykhaylyk | Ramona Duman | Louise Thomas | Marcel Jaspars | Armin Wagner | James H. Naismith

Errors in structural biology are not the exception

JOURNAL ARTICLE published 1 March 2023 in Acta Crystallographica Section D Structural Biology

Research funded by Deutsche Forschungsgemeinschaft (TH2135/21) | Bundesministerium für Bildung und Forschung (05K19WWA,05K22GU5)

Authors: Yunyun Gao | Volker Thorn | Andrea Thorn

Iron Metabolism. From Molecular Mechanisms to Clinical Consequences. Fourth Edition. By Robert Crichton. Wiley, 2016. Pp. xviii + 556. Price GBP 135.00 EUR 162.00, hardcover, ISBN 978-1-118-92561-4

JOURNAL ARTICLE published 1 November 2017 in Acta Crystallographica Section D Structural Biology

Authors: Massimo Nespolo

Free Radicals in Biology and Medicine. Fifth Edition.By Barry Halliwell and John M. C. Gutteridge. Oxford University Press, 2015. Pp. xxxviii + 905. Price GBP 70.00 (paperback, ISBN 9780198717485), GBP 125.00 (hardback, ISBN 9780198717478).

JOURNAL ARTICLE published 1 April 2017 in Acta Crystallographica Section D Structural Biology

Authors: Massimo Nespolo