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Merged Map of the Yeast Proteome

JOURNAL ARTICLE published February 2018 in Cell Systems

Authors: Alexander Schmidt

Observations and implication of thermal tolerance in the Arabidopsis proteome

JOURNAL ARTICLE published October 2023 in Cell Systems

Authors: Alisdair R. Fernie | Youjun Zhang

Evaluation of Schink et al.: Having the Gem Shine through a Fog

JOURNAL ARTICLE published July 2019 in Cell Systems

Research funded by European Research Council (#677972) | Netherlands Organisation for Scientific Research (#680-47-544)

Authors: Diederik S. Laman Trip | Théo Maire | Hyun Youk

Tackling Antibiotic Resistance with Systems-Level Perspective

JOURNAL ARTICLE published December 2017 in Cell Systems

Authors: Jiafeng Liu | Orit Gefen | Nathalie Q. Balaban

Reflections on Covers

JOURNAL ARTICLE published November 2017 in Cell Systems

Authors: H. Craig Mak

Cellular Advantages to Signaling in a Digital World

JOURNAL ARTICLE published August 2016 in Cell Systems

Authors: Christopher P. Mancuso | Szilvia Kiriakov | Ahmad S. Khalil

Pillars for a New Era of Cancer Research

JOURNAL ARTICLE published March 2018 in Cell Systems

Authors: H. Craig Mak | Ernesto Andrianantoandro

Kinetochores: Importance of Being Fashionably Late

JOURNAL ARTICLE published June 2017 in Cell Systems

Authors: Jennifer C. Fung

How Has the COVID-19 Pandemic Changed How You Will Approach Research and Lab Work in the Future?

JOURNAL ARTICLE published December 2020 in Cell Systems

Authors: Karmella Haynes | Christopher Yau | Andrea Bild | Ashley Laughney | Leonardo Morsut | Xia Yang | Judith Zaugg | Patrick Hsu | Vera Pancaldi | Srividya Iyer-Biswas

Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics

JOURNAL ARTICLE published June 2023 in Cell Systems

Authors: David B. Morse | Aleksandra M. Michalowski | Michele Ceribelli | Joachim De Jonghe | Maria Vias | Deanna Riley | Theresa Davies-Hill | Ty Voss | Stefania Pittaluga | Christoph Muus | Jiamin Liu | Samantha Boyle | David A. Weitz | James D. Brenton | Jason D. Buenrostro | Tuomas P.J. Knowles | Craig J. Thomas

Convolutions are competitive with transformers for protein sequence pretraining

JOURNAL ARTICLE published March 2024 in Cell Systems

Authors: Kevin K. Yang | Nicolo Fusi | Alex X. Lu

Conserved Epigenetic Regulatory Logic Infers Genes Governing Cell Identity

JOURNAL ARTICLE published December 2020 in Cell Systems

Authors: Woo Jun Shim | Enakshi Sinniah | Jun Xu | Burcu Vitrinel | Michael Alexanian | Gaia Andreoletti | Sophie Shen | Yuliangzi Sun | Brad Balderson | Carles Boix | Guangdun Peng | Naihe Jing | Yuliang Wang | Manolis Kellis | Patrick P.L. Tam | Aaron Smith | Michael Piper | Lionel Christiaen | Quan Nguyen | Mikael Bodén | Nathan J. Palpant

Cell Lineage Trees Bear Fruit

JOURNAL ARTICLE published December 2016 in Cell Systems

Authors: Jordi Garcia-Ojalvo

Trends in Precision Medicine: An Interview with UCSF’s Atul Butte

JOURNAL ARTICLE published October 2015 in Cell Systems

Authors: H. Craig Mak

The trans-regulatory landscape of gene networks in plants

JOURNAL ARTICLE published June 2023 in Cell Systems

Authors: Niklas F.C. Hummel | Andy Zhou | Baohua Li | Kasey Markel | Izaiah J. Ornelas | Patrick M. Shih

Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics

JOURNAL ARTICLE published October 2015 in Cell Systems

Research funded by National Institutes of Health (GM068837)

Authors: Aarash Bordbar | Douglas McCloskey | Daniel C. Zielinski | Nikolaus Sonnenschein | Neema Jamshidi | Bernhard O. Palsson

Elucidation of Signaling Pathways from Large-Scale Phosphoproteomic Data Using Protein Interaction Networks

JOURNAL ARTICLE published December 2016 in Cell Systems

Research funded by I-CORE Centers of Excellence in Gene Regulation in Complex Human Disease (41/11) | I-CORE Program (757/12) | Israel Science Foundation (241/11)

Authors: Jan Daniel Rudolph | Marjo de Graauw | Bob van de Water | Tamar Geiger | Roded Sharan

The Design Principles of Biochemical Timers: Circuits that Discriminate between Transient and Sustained Stimulation

JOURNAL ARTICLE published September 2019 in Cell Systems

Authors: Jaline Gerardin | Nishith R. Reddy | Wendell A. Lim

In Vivo Decoding Mechanisms of the Temporal Patterns of Blood Insulin by the Insulin-AKT Pathway in the Liver

JOURNAL ARTICLE published July 2018 in Cell Systems

Research funded by Japan Society for the Promotion of Science (16H06577) | CREST (JPMJCR12W3) | JSPS (17H06300,17H06299)

Authors: Hiroyuki Kubota | Shinsuke Uda | Fumiko Matsuzaki | Yukiyo Yamauchi | Shinya Kuroda

RNA Structural Determinants of Optimal Codons Revealed by MAGE-Seq

JOURNAL ARTICLE published December 2016 in Cell Systems

Research funded by National Defense Science and Engineering Graduate (NDSEG) Fellowship (32 CFR 168a) | National Institutes of Health (1DP5OD009172-02,1U01GM110714-01A1) | National Science Foundation (MCB-1453219) | Sloan Foundation (FR-2015-65795) | Defense Advanced Research Projects Agency (W911NF-15-2-0065) | ONR (N00014-15-1-2704) | NIH (R01 GM081617) | European Research Council FP7 ERC (281891)

Authors: Eric D. Kelsic | Hattie Chung | Niv Cohen | Jimin Park | Harris H. Wang | Roy Kishony