CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes

JOURNAL ARTICLE published 3 December 2022 in Mobile DNA

Research funded by Agence Nationale de la Recherche (ANR-17-CE20-0001)

Authors: Héléna Vassilieff | Sana Haddad | Véronique Jamilloux | Nathalie Choisne | Vikas Sharma | Delphine Giraud | Mariène Wan | Saad Serfraz | Andrew D. W. Geering | Pierre-Yves Teycheney | Florian Maumus

Identification of three new Alu Yb subfamilies by source tracking of recently integrated Alu Yb elements

JOURNAL ARTICLE published December 2013 in Mobile DNA

Authors: Musaddeque Ahmed | Wen Li | Ping Liang

Christophe Terzian (1959-2016)

JOURNAL ARTICLE published December 2016 in Mobile DNA

Authors: French Network on Mobile Genetic Elements

Characterization of a functional insertion sequence ISSau2 from Staphylococcus aureus

JOURNAL ARTICLE published December 2018 in Mobile DNA

Research funded by National Natural Science Foundation of China (31372282)

Authors: Liangliang Wang | Wei Si | Huping Xue | Xin Zhao

Deciphering fact from artifact when using reporter assays to investigate the roles of host factors on L1 retrotransposition

JOURNAL ARTICLE published December 2016 in Mobile DNA

Authors: Pamela R. Cook | G. Travis Tabor

Correction to: Transcriptome analyses of tumor-adjacent somatic tissues reveal genes co-expressed with transposable elements

JOURNAL ARTICLE published December 2019 in Mobile DNA

Authors: Nicky Chung | G. M. Jonaid | Sophia Quinton | Austin Ross | Corinne E. Sexton | Adrian Alberto | Cody Clymer | Daphnie Churchill | Omar Navarro Leija | Mira V. Han

Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study

JOURNAL ARTICLE published December 2020 in Mobile DNA

Authors: Pavel Jedlicka | Matej Lexa | Ivan Vanat | Roman Hobza | Eduard Kejnovsky

Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea

JOURNAL ARTICLE published 24 April 2023 in Mobile DNA

Research funded by National Research Foundation of Korea (No. 2020R1A5A2031185,No. 2020R1A5A2031185,No. 2020R1A5A2031185,No. 2020R1A5A2031185,No. 2020R1A5A2031185,No. 2020R1A5A2031185)

Authors: Thanh Quang Tran | Minyoung Park | Jong Eun Lee | Soo Hyun Kim | Jae-Ho Jeong | Hyon E. Choy

Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas9

JOURNAL ARTICLE published December 2021 in Mobile DNA

Research funded by National Institutes of Health (R01CA112226,F31CA225053-01A1,P01AG051449,R21CA235521,R01GM127267)

Authors: Erica M. Briggs | Paolo Mita | Xiaoji Sun | Susan Ha | Nikita Vasilyev | Zev R. Leopold | Evgeny Nudler | Jef D. Boeke | Susan K. Logan

Bridging gaps in transposable element research with single-molecule and single-cell technologies

JOURNAL ARTICLE published December 2018 in Mobile DNA

Research funded by Vetenskapsrådet (2018-00767) | Wenner-Gren Foundation (ESv2018-0014)

Authors: Claudia Kutter | Patric Jern | Alexander Suh

Jerzy Jurka: June 4, 1950 – July 19, 2014

JOURNAL ARTICLE published 2015 in Mobile DNA

Authors: Elzbieta Jurka

Mobile DNA and the TE-Thrust hypothesis: supporting evidence from the primates

JOURNAL ARTICLE published 2011 in Mobile DNA

Authors: Keith R Oliver | Wayne K Greene

Evolution of a transposon in Daphnia hybrid genomes

JOURNAL ARTICLE published December 2013 in Mobile DNA

Authors: Roland Vergilino | Tyler A Elliott | Philippe Desjardins-Proulx | Teresa J Crease | France Dufresne

Genome-wide comparison of Asian and African rice reveals high recent activity of DNA transposons

JOURNAL ARTICLE published December 2015 in Mobile DNA

Authors: Stefan Roffler | Thomas Wicker

Impact of ploidy level on the distribution of Pokey element insertions in the Daphnia pulex complex

JOURNAL ARTICLE published 2014 in Mobile DNA

Authors: Roland Vergilino | Shannon HC Eagle | Teresa J Crease | France Dufresne

Ginger DNA transposons in eukaryotes and their evolutionary relationships with long terminal repeat retrotransposons

JOURNAL ARTICLE published December 2010 in Mobile DNA

Authors: Weidong Bao | Vladimir V Kapitonov | Jerzy Jurka

Two-hybrid analysis of Ty3 capsid subdomain interactions

JOURNAL ARTICLE published December 2010 in Mobile DNA

Authors: Min Zhang | Liza SZ Larsen | Becky Irwin | Virginia Bilanchone | Suzanne Sandmeyer

Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

JOURNAL ARTICLE published December 2018 in Mobile DNA

Research funded by Deutsche Forschungsgemeinschaft (DFG DA 545/3-1)

Authors: Annette Damert

Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme

JOURNAL ARTICLE published December 2016 in Mobile DNA

Research funded by National Health and Medical Research Council (GNT1068789,GNT1106206) | Seventh Framework Programme (259743) | Australian Research Council (DE150101117) | Wellcome Trust (090386/Z/09/Z)

Authors: Patricia E. Carreira | Adam D. Ewing | Guibo Li | Stephanie N. Schauer | Kyle R. Upton | Allister C. Fagg | Santiago Morell | Michaela Kindlova | Patricia Gerdes | Sandra R. Richardson | Bo Li | Daniel J. Gerhardt | Jun Wang | Paul M. Brennan | Geoffrey J. Faulkner

A unique cluster of roo insertions in the promoter region of a stress response gene in Drosophila melanogaster

JOURNAL ARTICLE published December 2019 in Mobile DNA

Research funded by H2020 European Research Council (H2020-ERC-2014-CoG-647900)

Authors: Miriam Merenciano | Camillo Iacometti | Josefa González