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New restraints and validation approaches for nucleic acid structures in PDB-REDO

JOURNAL ARTICLE published 1 September 2021 in Acta Crystallographica Section D Structural Biology

Research funded by Horizon 2020 Framework Programme (871037) | National Institutes of Health (R01HG003008)

Authors: Ida de Vries | Tim Kwakman | Xiang-Jun Lu | Maarten L. Hekkelman | Mandar Deshpande | Sameer Velankar | Anastassis Perrakis | Robbie P. Joosten

Microcrystal delivery by pulsed liquid droplet for serial femtosecond crystallography

JOURNAL ARTICLE published 1 April 2016 in Acta Crystallographica Section D Structural Biology

Authors: Fumitaka Mafuné | Ken Miyajima | Kensuke Tono | Yoshihiro Takeda | Jun-ya Kohno | Naoya Miyauchi | Jun Kobayashi | Yasumasa Joti | Eriko Nango | So Iwata | Makina Yabashi

Targeting the innate immune receptor TLR8 using small-molecule agents

JOURNAL ARTICLE published 1 July 2020 in Acta Crystallographica Section D Structural Biology

Research funded by Japan Society for the Promotion of Science (19H00976,1921830)

Authors: Kentaro Sakaniwa | Toshiyuki Shimizu

Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum. Corrigendum

JOURNAL ARTICLE published 1 July 2021 in Acta Crystallographica Section D Structural Biology

Authors: Leona Švecová | Lars Henrik Østergaard | Tereza Skálová | Kirk Matthew Schnorr | Tomáš Koval' | Petr Kolenko | Jan Stránský | David Sedlák | Jarmila Dušková | Mária Trundová | Jindřich Hašek | Jan Dohnálek

Bacteroides thetaiotaomicron generates diverse α-mannosidase activities through subtle evolution of a distal substrate-binding motif

JOURNAL ARTICLE published 1 May 2018 in Acta Crystallographica Section D Structural Biology

Research funded by Biotechnology and Biological Sciences Research Council (BB/G016127/1)

Authors: Andrew J. Thompson | Richard J. Spears | Yanping Zhu | Michael D. L. Suits | Spencer J. Williams | Harry J. Gilbert | Gideon J. Davies

Neutron scattering for the study of biological systems – major opportunities within a rapidly changing landscape

JOURNAL ARTICLE published 1 December 2018 in Acta Crystallographica Section D Structural Biology

Authors: V. Trevor Forsyth | Peter Moody

Lattice filter for processing image data of three-dimensional protein nanocrystals

JOURNAL ARTICLE published 1 January 2016 in Acta Crystallographica Section D Structural Biology

Authors: E. van Genderen | Y.-W. Li | I. Nederlof | J. P. Abrahams

Unravelling the secrets of multi-domain lytic polysaccharide monooxygenases (LPMOs)

JOURNAL ARTICLE published 1 June 2023 in Acta Crystallographica Section D Structural Biology

Authors: Gustav Vaaje-Kolstad | Vincent G. H. Eijsink

The structure of VgrG1 fromPseudomonas aeruginosa, the needle tip of the bacterial type VI secretion system

JOURNAL ARTICLE published 1 January 2016 in Acta Crystallographica Section D Structural Biology

Authors: Mercedes Spínola-Amilibia | Irene Davó-Siguero | Federico M. Ruiz | Elena Santillana | Francisco Javier Medrano | Antonio Romero

Data mining of iron(II) and iron(III) bond-valence parameters, and their relevance for macromolecular crystallography

JOURNAL ARTICLE published 1 April 2017 in Acta Crystallographica Section D Structural Biology

Research funded by National Institute of General Medical Sciences (GM117325,GM117080) | National Institute of Allergy and Infectious Diseases (HHSN272201200026C) | Medical Research Council (MC_UP_A025_1012)

Authors: Heping Zheng | Karol M. Langner | Gregory P. Shields | Jing Hou | Marcin Kowiel | Frank H. Allen | Garib Murshudov | Wladek Minor

High-performance macromolecular data delivery and visualization for the web. Corrigendum

JOURNAL ARTICLE published 1 January 2021 in Acta Crystallographica Section D Structural Biology

Authors: David Sehnal | Radka Svobodová | Karel Berka | Alexander S. Rose | Stephen K. Burley | Sameer Velankar | Jaroslav Koča

Current trends in macromolecular model refinement and validation

JOURNAL ARTICLE published 1 January 2024 in Acta Crystallographica Section D Structural Biology

Authors: Melanie Vollmar | Robert Nicholls | Svetlana Antonyuk

Optimizing the refinement of merohedrally twinned P61 HIV-1 protease–inhibitor cocrystal structures

JOURNAL ARTICLE published 1 March 2020 in Acta Crystallographica Section D Structural Biology

Research funded by National Institute of General Medical Sciences (P01GM109767)

Authors: Gordon J. Lockbaum | Florian Leidner | William E. Royer | Nese Kurt Yilmaz | Celia A. Schiffer

Towards the automation of in situ experimental phasing

JOURNAL ARTICLE published 1 September 2020 in Acta Crystallographica Section D Structural Biology

Research funded by National Institutes of Health (P01GM063210) | U.S. Department of Energy (DE-AC02-05CH1123)

Authors: Dorothee Liebschner

Rosalind Franklin 1920–1958

JOURNAL ARTICLE published 1 July 2020 in Acta Crystallographica Section D Structural Biology

Authors: Elspeth F. Garman

The actions of volatile anesthetics: a new perspective

JOURNAL ARTICLE published 1 December 2018 in Acta Crystallographica Section D Structural Biology

Authors: Michael Weinrich | David L. Worcester

Using iterative fragment assembly and progressive sequence truncation to facilitate phasing and crystal structure determination of distantly related proteins

JOURNAL ARTICLE published 1 May 2016 in Acta Crystallographica Section D Structural Biology

Authors: Yan Wang | Jouko Virtanen | Zhidong Xue | John J. G. Tesmer | Yang Zhang

Objective evaluation of radiation damage in a nucleoprotein complex

JOURNAL ARTICLE published 1 May 2016 in Acta Crystallographica Section D Structural Biology

Authors: Zbigniew Dauter

Mask-based approach to phasing of single-particle diffraction data. II. Likelihood-based selection criteria

JOURNAL ARTICLE published 1 January 2019 in Acta Crystallographica Section D Structural Biology

Research funded by Russian Foundation for Basic Research (16-04-01037a) | Deutsche Forschungsgemeinschaft (BA 1866/2-1, BA 1866/3-1, BA 1866/4-1, BA 1866/5-1)

Authors: Vladimir Y. Lunin | Natalia L. Lunina | Tatiana E. Petrova | Manfred W. Baumstark | Alexandre G. Urzhumtsev

Advances in experimental phasing

JOURNAL ARTICLE published 1 March 2016 in Acta Crystallographica Section D Structural Biology

Authors: Airlie J. McCoy | Thomas Schneider