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Showing results for ISSN matching 1748-7188

An algorithm to parse segment packing in predicted protein contact maps

JOURNAL ARTICLE published December 2016 in Algorithms for Molecular Biology

Authors: William R. Taylor

https://doi.org/10.1186/s13015-016-0080-x Actions

Global exact optimisations for chloroplast structural haplotype scaffolding

JOURNAL ARTICLE published 6 February 2024 in Algorithms for Molecular Biology

Authors: Victor Epain | Rumen Andonov

https://doi.org/10.1186/s13015-023-00243-1 Actions

Bitpacking techniques for indexing genomes: II. Enhanced suffix arrays

JOURNAL ARTICLE published December 2016 in Algorithms for Molecular Biology

Authors: Thomas D. Wu

https://doi.org/10.1186/s13015-016-0068-6 Actions

Reducing the worst case running times of a family of RNA and CFG problems, using Valiant’s approach

JOURNAL ARTICLE published December 2011 in Algorithms for Molecular Biology

Authors: Shay Zakov | Dekel Tsur | Michal Ziv-Ukelson

https://doi.org/10.1186/1748-7188-6-20 Actions

GrpClassifierEC: a novel classification approach based on the ensemble clustering space

JOURNAL ARTICLE published December 2020 in Algorithms for Molecular Biology

Authors: Loai Abdallah | Malik Yousef

https://doi.org/10.1186/s13015-020-0162-7 Actions

Sampling solution traces for the problem of sorting permutations by signed reversals

JOURNAL ARTICLE published December 2012 in Algorithms for Molecular Biology

Authors: Christian Baudet | Zanoni Dias | Marie-France Sagot

https://doi.org/10.1186/1748-7188-7-18 Actions

Evolving DNA motifs to predict GeneChip probe performance

JOURNAL ARTICLE published December 2009 in Algorithms for Molecular Biology

Authors: WB Langdon | AP Harrison

https://doi.org/10.1186/1748-7188-4-6 Actions

On the group theoretical background of assigning stepwise mutations onto phylogenies

JOURNAL ARTICLE published December 2012 in Algorithms for Molecular Biology

Authors: Mareike Fischer | Steffen Klaere | Minh Anh Thi Nguyen | Arndt von Haeseler

https://doi.org/10.1186/1748-7188-7-36 Actions

Back-translation for discovering distant protein homologies in the presence of frameshift mutations

JOURNAL ARTICLE published December 2010 in Algorithms for Molecular Biology

Authors: Marta Gîrdea | Laurent Noé | Gregory Kucherov

https://doi.org/10.1186/1748-7188-5-6 Actions

Review of “Bioinformatics: A Computing Perspective” edited by Shuba Gopal, Anne Haake, Rhys Price Jones and Paul Tymann

JOURNAL ARTICLE published December 2009 in Algorithms for Molecular Biology

Authors: Dae-Won Kim | Hong-Seog Park

https://doi.org/10.1186/1748-7188-4-9 Actions

Estimating the evidence of selection and the reliability of inference in unigenic evolution

JOURNAL ARTICLE published December 2010 in Algorithms for Molecular Biology

Authors: Andrew D Fernandes | Benjamin P Kleinstiver | David R Edgell | Lindi M Wahl | Gregory B Gloor

https://doi.org/10.1186/1748-7188-5-35 Actions

On the number of genomic pacemakers: a geometric approach

JOURNAL ARTICLE published January 2014 in Algorithms for Molecular Biology

Authors: Sagi Snir

https://doi.org/10.1186/s13015-014-0026-0 Actions

A multiobjective approach for identifying protein complexes and studying their association in multiple disorders

JOURNAL ARTICLE published December 2015 in Algorithms for Molecular Biology

Authors: Sanghamitra Bandyopadhyay | Sumanta Ray | Anirban Mukhopadhyay | Ujjwal Maulik

https://doi.org/10.1186/s13015-015-0056-2 Actions

Distinguishing linear and branched evolution given single-cell DNA sequencing data of tumors

JOURNAL ARTICLE published December 2021 in Algorithms for Molecular Biology

Research funded by Division of Computing and Communication Foundations (CCF 1850502,CCF 2046488)

Authors: Leah L. Weber | Mohammed El-Kebir

https://doi.org/10.1186/s13015-021-00194-5 Actions

New journal: Algorithms for Molecular Biology

JOURNAL ARTICLE published January 2006 in Algorithms for Molecular Biology

Authors: Burkhard Morgenstern | Peter F Stadler

https://doi.org/10.1186/1748-7188-1-1 Actions

Fast calculation of the quartet distance between trees of arbitrary degrees

JOURNAL ARTICLE published December 2006 in Algorithms for Molecular Biology

Authors: Chris Christiansen | Thomas Mailund | Christian NS Pedersen | Martin Randers | Martin Stig Stissing

https://doi.org/10.1186/1748-7188-1-16 Actions

Isometric gene tree reconciliation revisited

JOURNAL ARTICLE published December 2017 in Algorithms for Molecular Biology

Research funded by Agentúra na Podporu Výskumu a Vývoja (APVV-14-0253) | Vedecká Grantová Agentúra MŠVVaŠ SR a SAV (1/0684/16,1/0719/14,2/0165/16)

Authors: Broňa Brejová | Askar Gafurov | Dana Pardubská | Michal Sabo | Tomáš Vinař

https://doi.org/10.1186/s13015-017-0108-x Actions

Superbubbles revisited

JOURNAL ARTICLE published December 2018 in Algorithms for Molecular Biology

Research funded by Bundesministerium für Bildung und Forschung (01IS14014B)

Authors: Fabian Gärtner | Lydia Müller | Peter F. Stadler

https://doi.org/10.1186/s13015-018-0134-3 Actions

Characteristics of predictor sets found using differential prioritization

JOURNAL ARTICLE published December 2007 in Algorithms for Molecular Biology

Authors: Chia Huey Ooi | Madhu Chetty | Shyh Wei Teng

https://doi.org/10.1186/1748-7188-2-7 Actions

On the use of cartographic projections in visualizing phylo-genetic tree space

JOURNAL ARTICLE published December 2010 in Algorithms for Molecular Biology

Authors: Kenneth Sundberg | Mark Clement | Quinn Snell

https://doi.org/10.1186/1748-7188-5-26 Actions
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